This Week In OHDSI

The OHDSI community prides itself on global collaboration through open science. As a virtual community with collaborators on six different continents, we have weekly meetings to present research, share information, and keep each other updated on both current and upcoming projects. We hold these meetings on Tuesdays at 11 am ET in our Microsoft Teams environment. If you don’t have access to this, please fill out this form.

You can learn about our weekly calls, including the upcoming schedule of topics, and see materials (videos/slides/shoutouts) from previous calls by visiting our Community Calls page.

OHDSI has a variety of ongoing projects led by workgroups. Each workgroup has its own leadership team which determines the project’s objectives, goals and artifacts to be contributed to the community. Workgroup participation is open to all who have an interest in contributing to the project objectives and goals. Workgroups may be long-standing, strategic objectives or short-term projects to accomplish a specific need in the community. Each of the workgroups has its own home in the Teams environment, and you can get access to these groups by filling out this form (please note that you must have Teams access first, which is available through the first form linked above).

Please use our Upcoming Workgroup Calls page to see the upcoming schedule of calls (and appropriate links), as well as the standard schedule of calls for each group (weekly, bi-weekly, monthly, etc.).

The weekly update is below. If you missed any previous updates, or are looking for links to past updates or presentations, they are stored on our weekly Community Calls page.

We hope you will bring your talents, interests, curiosity and enthusiasm to OHDSI by joining both our weekly community calls and the workgroups that most interest you. That is how you #JoinTheJourney.

WEEKLY UPDATE • Jan. 24, 2023

The Jan. 24 community call hosted an important conversation about ways the OHDSI community can collaborate to achieve three strategic priorities presented at the start of the year.

During the initial community call of 2023, Patrick Ryan shared a trio of foundational pillars that need to be strengthened to enable reliable evidence generation. In this call, Patrick joined Anna Ostropolets and Clair Blacketer to propose specific strategies to address these three priorities:

  • Standardized vocabularies
  • Standardized data network
  • Collaborating on network studies: “The Sisyphus Challenge”

The video presentation and slide decks for each talk are available below.

Community Updates

• Save The Date! The 2023 OHDSI Global Symposium is scheduled for Oct. 20-22. The location and more details will be shared when available.

• There have been several recent releases from the HADES development team since the start of 2023, including SelfControlledCaseSeries 4.1.0, EvidenceSynthesis 0.4.0, SqlRender 1.11.1, and Characterization 0.0.5. Thank you to package maintainers Martijn Schuemie and Jenna Reps for their leadership with these open-source tools.

• JSM (Joint Statistical Meeting) 2023 will be held Aug. 5-10 at the Metro Toronto Convention Centre in Toronto, Canada. The call for abstracts is happening now, and the deadline is Feb. 1, 2023.

• ICPE 2023 will be held in person Aug. 23-27 at the Halifax Convention Center in Nova Scotia, Canada. The call for abstracts is happening right now, and the deadline is Feb. 13, 2023.

• The CBER BEST Seminar Series returns Wednesday, Feb. 8, at 11 am ET, as 2022 Titan Award recipient Fan Bu will provide a presentation on Bayesian Safety Surveillance with Adaptive Bias Correction. More information and a registration link is available here.

• Jenna Reps, co-lead of the PLP workgroup, recently shared several video tutorials of version 6 of the PatientLevelPrediction tool. The demos are available on both our website and our YouTube page.

• The 2023 Oxford Real World Evidence Summer School will take place June 19-23 at the University of Oxford. Dani Prieto-Alhambra will serve as a course director for a session that will provide participants with the tools and concepts necessary to plan and execute Real World Evidence studies, with a focus on the use of the OMOP common data model. More information and a registration link are available here.

• All workgroups should plan to share their 2023 OKRs during a February community call. If you are a workgroup lead, please sign up for a 3:00 minute slot on one of the four calls using this form.

OHDSI Social Showcase

• The #OHDSISocialShowcase continues this week, as all the research from the OHDSI Symposium collaborator showcase will be presented on the Twitter and LinkedIn social feeds over the next several months. You can see the research and the respective leads that will be shared this week.

Monday: Development of Machine Learning models for Cancer Survival among Lung cancer patients with Tyrosine Kinase Inhibitors (TKIs) treatment (Alex PA. Nguyen)
Tuesday: Analyzing the Effect of Hypertension on Retinal Thickness Using Radiology Common Data Model (R-CDM) (Chul Hyoung Park)
Wednesday: Comparing the impact of clean windows across cohorts and databases (Rupa Makadia)
Thursday: Assessing and Benchmarking Data Quality and Diversity in the All of Us (Lina Sulieman)
Friday: Moving OMOP to the cloud with DBT and Snowflake (Roger Carlson)

Slides

Standardized Vocabularies | Standardized Data Networks | Save Our Sisyphus Challenge | Community Updates

Presentations

Standardized Vocabularies (Anna Ostropolets)

Standardized Data Networks (Clair Blacketer)

Save Our Sisyphus Challenge (Patrick Ryan)