Documentation
Common Data Model (CDM)
Convert Database to CDM (ETL)
Tool Specific Documentation
Common Data Model (CDM)
Convert Database to CDM (ETL)
Tool Specific Documentation
The Snowflake is officially supported by OHDSI tools since September 2022 and starting with ATLAS/WebAPI 2.12 release.
Below is an example for connection to your Snowflake Instance from R code
# Download Snowflake JDBC driver # https://docs.snowflake.com/en/user-guide/jdbc-download.html install.packages("remotes") library(remotes) # Install DatabaseConnector and SqlRender install_github("ohdsi/DatabaseConnector") install_github("ohdsi/SqlRender") connectionDetails <- DatabaseConnector::createConnectionDetails( dbms = "snowflake", user = "My_user", password = "My_password", pathToDriver = "/path/to/driver", connectionString = "jdbc:snowflake://my-snowflake-url.snowflakecomputing.com?warehouse=My_Warehouse&db=My_Database" ) conn <- DatabaseConnector::connect(connectionDetails) DatabaseConnector::querySql(conn, "SELECT * FROM MY_OMOP_SCHEMA.vocabulary")