Conversion of UK Biobank into the OMOP CDM: New Data for Inferences Between Episodic Care (Amelia J Averitt, Alexandra Orlova, Alexander Davydov, Oleg Zhuk, Michael N Cantor, Gregory Klebanov)
Medication dosage and exposure duration in OMOP CDM: mapping challenges (Tatiana Banokina, Dmitry Dymshyts, Alexandra Orlova, Alexander Kraynov, Alexander Davydov)
Mapping UK Biobank to the OMOP CDM: challenges and solutions using the delphyne ETL framework (Sofia Bazakou, Maxim Moinat, Alessia Peviani, Anne van Winzum, Stefan Payralbe, Vaclav Papez, Spiros Denaxas)
The VISIT_DETAIL: A Vehicle for Standard Visits (Clair Blacketer)
Establishing a large COVID-19 cohort through mapping the Information System for Research in Primary Care (SIDIAP) in Catalonia to the OMOP Common Data Model (Sergio Fernandez-Bertolin, Erica A Voss, Clair Blacketer, Maria Aragón, Martina Recalde, Elena Roel, Carlen Reyes, Sebastiaan van Sandijk, Lars Halvorsen, Peter R Rijnbeek, Talita Duarte-Salles)
Linking Analysis Ready Multi-modal Clinical data (Priya Desai, Somalee Datta)
OMOP-CDM ETLs with Dask and Prefect (Freija Descamps, Roberto Guarnieri, Lars Halvorsen, Jared Houghtaling)
Ontology of Cancer Diagnosis in the OMOP Vocabulary (Dmitry Dymshyts, Vlad Korsik, Denys Kaduk, Mike Nerovnya, Alex Davydov, Christian Reich, Michael Gurley, Asieh Golozar, Shilpa Ratwani, Joseph Sirintrapun , W. Scott Campbell, Rimma Belenkaya)
Deriving Initial Disease Episode from Discrete Diagnosis (Michael Gurley, Asieh Golozar, Robert Miller, Rimma Belenkaya, Shilpa Ratwani, Shanta Bethusamy, Andrew Williams, Joseph Sirintrapun, Christian Reich)
LAISDAR – A federated data network to support COVID-19 research in Rwanda (Lars Halvorsen, Freija Descamps, Jared Houghtaling, Benjamin Burke, Francine Birungi, Clarisse Musanabaganwa, Jean Baptiste Byiringiro, Stefan Jansen, Celestin Twizere, Kizito Nkurikiyeyezu, Charles Ruranga, Aurore Nishimwe, Regina Mugeni, Jean N Utumatwishima, Damas Kabakambira, Sabin Nsanzimana, Marc Twagirumukiza)
Evaluation of vaccine concept mappings in OMOP vocabulary: a real-world database study (Denys Kaduk, Adam Black, Yupeng Li, Lixia Yao)
Representation of investigational drugs in the OMOP CDM (Michael Kallfelz, Dmitry Dymshyts, Meera Patel, Christian Reich, Jeremy Warner, Rimma Belenkaya)
Pragmatic OMOP CDM (Melanie Philofsky, Gregory Klebanov)
Near Real-Time Incremental OMOP-CDM ETL System (Seongwon Lee, Wanhee Lee, Seunghyung Lee, Ju Young Kim, Rae Woong Park)
Securing OHDSI on AWS for HIPAA and Research Data Management Compliance (Michael Lubke, Tapati Mazumdar, Murat Sincan, Catherine Hajek)
Empirical Assessment of Alternative Methods for Identifying Seasonality in Observational Healthcare Data (Anthony Molinaro, Frank DeFalco)
How vocabulary updates can affect individual OMOP instances (Daniel Park, Elise Gatsby, Benjamin Viernes, Kushan Hewa, Scott L. DuVall, Kristine E. Lynch)
Implementing & adopting a customized OMOP Common Data Model (Melanie Philofsky, Ufuoma Olakpe)
Scaling OHDSI open-source community projects, lessons learned by Oncology Work group (Shilpa Ratwani, Asieh Golozar, Michael Gurley, Andrew Williams, Robert Miller, Christian Reich, Dmitry Dymshyts, Michael Kallfelz, Rimma Belenkaya)
Machine Learning-assisted query and information retrieval system on real-world data (Miguel Romero Calvo, Yupeng Li, Tesfagabir Meharizghi, Weilin Meng, Selvan Senthivel, Saman Sarraf, Lin Lee Cheong)
Understanding Precision Medicine through the NIH All of Us Research Program and NCI Cancer Research Data Commons (Jay G. Ronquillo, William T. Lester)
Representation of High-Level Radiation Oncology Treatment Events from CPT Codes (Michael Gurley, Asieh Golozar, Rimma Belenkaya, Tatyana Sandler)
Assessing the Technical and Operational Feasibility of a Next-generation Data Capture and Processing Approach An Extension of OMOP-based Data Translation Developed by the Center for International Blood and Marrow Transplant Research (CIBMTR) (Ben Smith, Trent Peterson, Kristina Bloomquist)
A journey through VA’s uptake of the OMOP common data model (Benjamin Viernes, Elizabeth E Hanchrow, Steven M Johnson, Elise Gatsby, Michael E Matheny, Daniel J Park, Jill M Whitaker, Scott L Duvall, Kristine E Lynch)
REDHot OMOP: Facilitating Semantic Interoperability in REDCap with FHIR and the OMOP CDM (Salvatore Volpe, Karthik Natarajan)
LIGHTNING TALK: Data Quality Dashboard Used to Improve Data Quality in the EHDEN Network (Clair Blacketer, Erica Voss, Frank DeFalco, Maxim Moinat, Peter R Rijnbeek)
LIGHTNING TALK: Beyond Clinical: Integrating Research Assay Data into the Observational Health Data Sciences and Informatics Common Data Model (OHDSI CDM) through the Surgical Critical Care Initiative (SC2i) (Chandra Almond, William Patino, Ravi Sanka, Seth Schobel, Andrew MacKelfresh, Allan Kirk, Eric A. Elster)
LIGHTNING TALK: Extending the OMOP CDM to store the output of natural language processing pipelines (Monica Arrue, Sandra Pulido, Alvaro Abella, Gabriel Maeztu, Alberto Labarga) * 2021 Recipient of Best Community Contribution Award
LIGHTNING TALK: Validation of the Genomic Variant Vocabulary against TCGA (Denys Kaduk, Asieh Golozar, Peter Robinson, Michael Gurley, Seng Chan You, Shin Seojeong, Shaadi Mehr, Andrew Williams, Rimma Belenkaya, Shilpa Ratwani, Ron Miller, Christian Reich)