====== Minutes_Meeting_04132016 ====== ==== Attendees ==== Hua Xu, Jon Duke, George Hripcsak, Anupama Gururaj, Min Jiang, Alexandre Yahi, Noemie Elhadad, Olga Patterson, Scott DuVall, Lian Hu, Thomas Ginter ==== Agenda ==== {{:projects:workgroups:nlp_wg_meeting_04132016.pdf|}} - Discussion of NLP_TERM_TABLE – Hua/Noemie - Share existing ontologies Regenstrief (Jon) - Share strategies for combining data from different searches – Jon - Improvements to search engine set up using MT samples – Min - Wrappers for cTAKES and Metamap – Min ===Minutes=== - NLP term table presentation – Noemie {{:projects:workgroups:nlp_wg_meeting_04132016.pdf|}} - The note type concept ID is not very useful and should be replaced with a more standardized terminology such as LOINC ontology - Replace the current single element with 5 elements (pls see presentation for details) - Extend the note source value field to 255 varchar - In terms of the type of service, LOINC ontology is very complicated, A flat architecture would be better for the current purpose. Comparison with another institution should be carried out. - Date is to be added to the table - - Include all NLP concepts into one table called Note_NLP/Term_mention Table. This is an intermediate table that can then be linked to other tables in the CDM such as concept - Next steps: - Schedule another meeting in the following week to continue the discussion ===Action Items=== - Meeting next week to continue discussion - Share strategies for combining data from different searches - Jon - Wrappers for cTAKES and Metamap - Min - Improvements to search engine set up using MT samples - Min - Textual Data Representation - Discussion - NLP system evaluation across different sites - Discussion