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projects:workgroups:minutes [2015/10/22 19:13] anu_gururaj |
projects:workgroups:minutes [2015/10/29 18:36] (current) anu_gururaj [Agenda] |
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==== Agenda ==== | ==== Agenda ==== | ||
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+ | -IRB for use of clinical text | ||
+ | -Clinical text data storage and representation schema | ||
+ | - Presentation by Dr. Noemie Elhadad, Title: NLP schemas and clinical NLP tools in ShARe | ||
+ | - Discussion – Next steps | ||
+ | -NLP tools/pipelines for ETL | ||
+ | -Use cases, e.g, phenotyping for cohort selection using NLP outputs | ||
+ | - Presentation by Dr. Jon Duke, Title: Regenstrief NLP platform and approach to validation of phenotypes | ||
+ | - Discussion – Next steps | ||
+ | -Discussion | ||
+ | |||
+ | ===Minutes=== | ||
-IRB for use of clinical text | -IRB for use of clinical text | ||
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-Use cases, e.g, phenotyping for cohort selection using NLP outputs | -Use cases, e.g, phenotyping for cohort selection using NLP outputs | ||
- Presentation by Dr. Jon Duke, Title: Regenstrief NLP platform and approach to validation of phenotypes | - Presentation by Dr. Jon Duke, Title: Regenstrief NLP platform and approach to validation of phenotypes | ||
+ | - the NLP platform is composed of a state machine with Regex based system | ||
+ | - the NLP data analysis tool is currently being used for data analytics at Regenstrief. | ||
+ | - the tool has text search capabilities and was demonstrated at the meeting | ||
- Discussion – Next steps | - Discussion – Next steps | ||
+ | - need to determine if the API for keyword search based on Solr or ElasticSearch can be shared | ||
-Discussion | -Discussion |