User Tools

Site Tools


documentation:software:atlas:data-sources

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
documentation:software:atlas:data-sources [2016/08/19 15:42]
jhardin
documentation:software:atlas:data-sources [2019/05/30 20:44] (current)
anthonysena
Line 1: Line 1:
-Atlas now provides the ability to review descriptive statistics about an OMOP CDM. This functionality was originally built by as part of the [[http://​www.ohdsi.org/​web/​wiki/​doku.php?​id=documentation:​software:​achilles|Achilles working group]]. ​+~~NOTOC~~ 
 +===== IMPORTANT NOTE =====
  
-===== Prerequisite Setup =====+All ATLAS documentation has moved to [[https://​github.com/​OHDSI/​ATLAS/​wiki|GitHub]]. Please disregard the content below as it is legacy and kept for posterity.
  
 +======Data Sources (LEGACY)======
 +----
  
 +Atlas now provides the ability to review descriptive statistics about an OMOP CDM. This functionality was originally built by as part of the [[http://​www.ohdsi.org/​web/​wiki/​doku.php?​id=documentation:​software:​achilles|Achilles working group]]. ​
  
 +===== Prerequisite Setup =====
  
-You must install Achilles in order to use this feature in Atlas. See the [[https://github.com/OHDSI/Atlas/wiki/Installation-&​-Setup#​cdm-statistics-achilles|installation and setup guide]] for more details.+You must install Achilles in order to use this feature in Atlas. See the [[http://www.ohdsi.org/web/wiki/doku.php?​id=documentation:​software:​achilles#​installation_and_support|installation and support]] for more details.
  
 ===== Navigating Reports ===== ===== Navigating Reports =====
  
-In the top right of the data sources page you will find two drop downs: ​Data Sources ​and ReportsThe data sources pull down will contain ​the list of data sources that were configured when setting up [[https://github.com/OHDSI/​Atlas/​wiki/​Installation-&​-Setup#​cdm-statistics-achilles|installation and setup guide]]The reports section will contain ​the list of available reports.+In Atlas, select ​the **Data Sources** menu itemNext select a data source to use for exploring the database characterization reports:  
 + 
 +{{ :​documentation:​software:​atlas:​atlas_data_sources_select.png?​direct |}} 
 +Next, use the second drop down to explore reports for the selected ​data source: 
 +{{ :​documentation:​software:​atlas:​atlas_data_sources_report.png?direct |}} 
 +Certain reports provide a treemap/table view with a capability to drilldown into details for a concept. For example, the condition report provides the treemap view as a default: 
 +{{ :​documentation:​software:​atlas:​atlas_data_sources_treemap.png?​direct ​|}} 
 +Use the tabs to select the '​table'​ option to view a tabular display of the concepts represented in the treemap: 
 +{{ :​documentation:​software:​atlas:​atlas_data_sources_table.png?direct |}} 
 +You can filter ​the results shown above by using the '​Search:'​ in the upper-right hand corner ​of the table displayOnce you have a concept of interest, you can drill down by clicking on the row in the table (or a cell in the treemap) to reveal further details: 
 +{{ :​documentation:​software:​atlas:​atlas_data_sources_drilldown.png?​direct |}} 
documentation/software/atlas/data-sources.1471621332.txt.gz · Last modified: 2016/08/19 15:42 by jhardin