documentation:oncology:meeting_notes_2019_jun-11
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documentation:oncology:meeting_notes_2019_jun-11 [2019/06/12 14:28] mgurley |
documentation:oncology:meeting_notes_2019_jun-11 [2019/08/18 13:31] (current) mgurley |
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| + | **Meeting Notes June 11, 2019** | ||
| + | |||
| **Topics** | **Topics** | ||
| - | * The group reviewed the following presentation: | + | * The group reviewed the following presentation: |
| {{:documentation:oncology:ohdsi_oncology_meeting_06_11_2019.pdf| Presentation}} | {{:documentation:oncology:ohdsi_oncology_meeting_06_11_2019.pdf| Presentation}} | ||
| - | * The group discussed SQL showing to map ICDO Site/Histology combinations to per-coordinated Condition concepts. | + | * The group discussed SQL showing how to map ICDO Site/Histology combinations to pre-coordinated Condition concepts. |
| + | |||
| + | * The group discussed SQL showing how to find all Site/Histology combinations containing a particular ICDO site or histology. | ||
| + | |||
| + | * It was announced that ICDO is currently already implemented within Athena and folks should try mapping their ICDO data. | ||
| + | |||
| + | * The group discussed the plan to adopt NAACCR as OMOPS's standard vocabulary of cancer diagnosis modifiers and the plant to transition NAACCR from a standard vocabulary to source vocabulary by mapping NAACCR to the Nebraska Lexicon. | ||
| + | |||
| + | * Concern was expressed regarding the timeline for when the Nebraska Lexicon would be completed. | ||
| + | |||
| + | * There was consensus in the group that the OMOP community needs to standardize the representation of cancer diagnosis modifiers. Some members of the group might take a swipe at recommending cancer diagnosis modifiers ahead of the Nebraska Lexicon completion date. | ||
| + | |||
| + | * It was announced that the Hemonc.org drug regimen ontology has been released within Athena. | ||
| - | * The group discussed SQL showing how to find all Site/Histology combinations containing a particular ICDO site or histology. | + | * The group discussed the current state of the Hemonc.org vocabulary. Regimens and regimen components mapped to RxNorm ingredients. Plus a better drug oncology classification system. |
| - | * It was announced that ICDO is currently already implemented within Athena and folks should try mapping their ICDO data. | + | * The group asked about the future possibility of including regimen dosing, cycles and indications. Dmytry informed the group that these items would be part of future releases. |
| - | * The group discussed the plan to adopt NAACCR as OMOPS's standard vocabulary of cancer diagnosis modifiers and the plant to transition NAACCR from a standard vocabulary to source vocabulary by mapping NAACCR to the Nebraska Lexicon. | + | |
| - | * Concern was expressed regarding the timeline for when the Nebraska Lexicon would be completed. | + | |
| - | * There was consensus in the group that the OMOP community needs to standardize the representation of cancer diagnosis modifiers. Some members of the group might take a swipe at recommending cancer diagnosis modifiers ahead of the Nebraska Lexicon completion date. | + | |
| - | * It was announced that the Hemonc.org drug regimen ontology has been released within Athena. | + | |
| - | * The group discussed the current state the Hemonc.org vocabulary. Regimens and regiment components mapped to RxNorm ingredients. Plus a better drug oncology classification system. | + | |
| - | * The group asked about the future possibility of including regimen dosing, cycles and indications. Dmytry informed the group that these items would be part of future releases. | + | |
documentation/oncology/meeting_notes_2019_jun-11.1560349715.txt.gz · Last modified: 2019/06/12 14:28 by mgurley
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